CNM Wiki - User contributions [en]

Vortex ME4 (SII 4-element silicon drift diode)

2011-05-05T17:06:49Z

Vrose:

Back to [[X-Ray Microscopy]]
===Manuals===
[[media:Vortex-ME4 Multi-El User Manual Rev.4.doc]] 
[[media:VortexME4_specs_Rev.3.3.pdf|Specifications for Vortex-ME4 Multi-Element SDD X-ray Spectrometer]] 
[[media:MAN-XMAP_1.0.3.pdf|Digital X-ray Processor User's Manual]] 

===Computer Controls===
Start epics ioc ''startEPICS2-7 8 Channel'' (on Desktop) 
Controls Computer: gluck@cnm.aps.anl.gov
 

===Drawings ===
====Drawing of collimator 30-5. ====
Cap drawing: [[media:30_5mm_cap_rot.pdf]] 
Assembly drawing: [[media:30_5mm_assy_landscape.pdf‎]] 
Detector/collimator geometry [[media:SDD_4el_collimator_28feb08.jpg]]
[[Category:XMG]][[Category:Fluorescence]][[Category:Controls]]

===Vacuum===
----
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''IP voltage (V)'''
| align="center" style="background:#f0f0f0;"|'''Pressure (torr) '''
|-
|-
| -0.1|| 6E-8
|-
| -1|| 6E-7
|-
| -10|| 6E-6
|-
|}
----

Pewin

2011-04-12T15:01:53Z

Vrose:

Back to [[X-Ray Microscopy]]

'''Laser Watch Window'''
{| {{table}}
| align="center" style="background:#f0f0f0;"|'''Laser'''
| align="center" style="background:#f0f0f0;"|'''description'''
|-
| M8120||FOMz
|-
| M8121||FOMx/SAMx
|-
| M8122||FOMy/SAMy
|-
| M8123||SAMx
|-
| M8124||FOMx2
|-
| M8125||SAMy
|-
| M8126||FOMy
|-
| M8127||spare
|-
|}

'''Pewin Calculations'''
{| {{table}}
| align="center" style="background:#f0f0f0;"|'''command'''
| align="center" style="background:#f0f0f0;"|'''description'''
|-
| enaplc 7||zero lasers
|-
| m3695=n||HybX calculation, n=5 full, n=1 SAM-Y1
|-
| m3696=n||HybY calculation, n=5 full, n=1 SAM-Y1
|-
|}

'''Remarks:'''
Pewin Device 02 controls lasers.

[[Category:XMG]][[Category:Controls]]

Pewin

2011-04-11T14:16:54Z

Vrose: Created page with "Back to X-Ray Microscopy Pewin Device 02 controls lasers. {| {{table}} | align="center" style="background:#f0f0f0;"|'''command''' | align="center" style="background:#f0f0f0…"

Back to [[X-Ray Microscopy]]

Pewin Device 02 controls lasers.

{| {{table}}
| align="center" style="background:#f0f0f0;"|'''command'''
| align="center" style="background:#f0f0f0;"|'''description'''
|-
| enaplc 7||zero lasers
|-
| m3695=n||HybX calculation, n=5 full, n=1 SAM-Y1
|-
| m3696=n||HybY calculation, n=5 full, n=1 SAM-Y1
|-
|}
[[Category:XMG]][[Category:Controls]]

Beamline Controls

2011-04-11T14:10:45Z

Vrose:

Back to [[X-Ray Microscopy]]
===How to...===
*[[Restart an IOC]]
===Computers===
*[[Sector 26 beamline Computers]] and download of the associated [[media:S26_Beamline_Computers.xls|excel spreadsheet]]
===Printer===
*Model: [http://h10010.www1.hp.com/wwpc/us/en/sm/WF05a/18972-236251-236268-15077-f51-315849.html HP Color LaserJet 3700DN]
*Name: Flute-S26ID
*Command line: lpr -P Flute-S26ID
===Pewin===
*[[Pewin]] commands
===Linux===
*Useful [[Linux commands]]
===Wiki===
*[http://people.fas.harvard.edu/~sdouglas/table.cgi Excel to Wiki converter]
[[Category:XMG]][[Category:Controls]]

Restart an IOC

2010-02-08T20:36:31Z

Vrose:

Back to [[X-Ray Microscopy]]

1) ssh to IOC (e.g., ssh epicsioc@ioc26idcdet) 
2) type epicsioc 
3) startioc 

You also can 'shutdown' the IOC.

[[Category:XMG]][[Category:Controls]]

Restart an IOC

2010-02-08T20:35:08Z

Vrose:

Back to [[X-Ray Microscopy]]

1) ssh to IOC (e.g., ssh epicsioc@ioc26idcdet)
2) type epicsioc
3) startioc

You also can 'shutdown' the IOC.

[[Category:XMG]][[Category:Controls]]

Restart an IOC

2010-02-08T20:34:17Z

Vrose: New page: Back to X-Ray Microscopy 1) ssh to IOC (e.g., ssh epicsioc@ioc26idcdet) 2) type epicsioc 3) startioc You also can 'shutdown' the IOC.

Back to [[X-Ray Microscopy]]

1) ssh to IOC (e.g., ssh epicsioc@ioc26idcdet)
2) type epicsioc
3) startioc

You also can 'shutdown' the IOC.

Beamline Controls

2010-02-08T20:31:18Z

Vrose:

Back to [[X-Ray Microscopy]]
===How to...===
*[[Restart an IOC]]
===Computers===
*[[Sector 26 beamline Computers]] and download of the associated [[media:S26_Beamline_Computers.xls|excel spreadsheet]]
===Printer===
*Model: [http://h10010.www1.hp.com/wwpc/us/en/sm/WF05a/18972-236251-236268-15077-f51-315849.html HP Color LaserJet 3700DN]
*Name: Flute-S26ID
*Command line: lpr -P Flute-S26ID

===Linux===
*Useful [[Linux commands]]
===Wiki===
*[http://people.fas.harvard.edu/~sdouglas/table.cgi Excel to Wiki converter]
[[Category:XMG]][[Category:Controls]]

Focusing optics module (FOM)

2010-02-02T20:11:43Z

Vrose:

Back to [[X-Ray Microscopy]]

[http://www.gmail.com] 

[[Image:FOM positions.jpg|thumb|Zone plate holder; upstream view]]
[[Image:FOM ZP holder.jpg|thumb|Zone plate holder; side view]]

==10 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||1830 ||-17.76||-1548.8||-1409 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - ||3814 ||-1614 || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||1845 ||62.36 ||2510.6 ||-1409 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||1845 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

==11.2 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||-1295 ||-17.76||-1548.8||500 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - || - || - || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||-1280 ||52.4 ||2505 ||500 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||-1280 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

[[Image:OSA positions.jpg|thumb|OSA]]
----
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''OSA description '''
| align="center" style="background:#f0f0f0;"|'''Date installed'''
|-
|-
| 4|| none || -
|-
| 3|| none || 02/02/10
|-
| 2|| 100 um || 02/02/10 lead on back
|-
| 1|| 30 um inside cone || 02/02/10
|-
|}
----
Focus of the ZP24/133sngl zone plate: 
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Energy (keV) at DCM'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 10.0 ||1150 ||Mar/5/09 Cr wire/Staff ||
|-
| 11.2 ||-2030 ||Mar/19/09 Ni pad/Moutanabbir ||
|}
----
'''[[Condenser module (CM)|Condenser module (CM)]] ''out'':''' 
Condensor X = -3500 
Condensor Y = -6000 
Condensor Z = 

'''[[Imaging optics module (IOM)|Imaging optics module (IOM)]] ''out'':''' 
Objective X = 
Objective Y = -2500 
Objective Z = 

[[Category:XMG]][[Category:Fluorescence]][[Category:Diffraction]][[Category:Tomography]][[Category:Controls]]

Focusing optics module (FOM)

2010-02-02T20:05:35Z

Vrose:

Back to [[X-Ray Microscopy]]
[[Image:FOM positions.jpg|thumb|Zone plate holder; upstream view]]
[[Image:FOM ZP holder.jpg|thumb|Zone plate holder; side view]]

==10 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||1830 ||-17.76||-1548.8||-1409 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - ||3814 ||-1614 || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||1845 ||62.36 ||2510.6 ||-1409 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||1845 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

==11.2 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||-1295 ||-17.76||-1548.8||500 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - || - || - || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||-1280 ||52.4 ||2505 ||500 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||-1280 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

[[Image:OSA positions.jpg|thumb|OSA]]
----
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''OSA description '''
| align="center" style="background:#f0f0f0;"|'''Date installed'''
|-
|-
| 4|| none || -
|-
| 3|| none || 02/02/10
|-
| 2|| 100 um || 02/02/10 lead on back
|-
| 1|| 30 um inside cone || 02/02/10
|-
|}
----
Focus of the ZP24/133sngl zone plate: 
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Energy (keV) at DCM'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 10.0 ||1150 ||Mar/5/09 Cr wire/Staff ||
|-
| 11.2 ||-2030 ||Mar/19/09 Ni pad/Moutanabbir ||
|}
----
'''[[Condenser module (CM)|Condenser module (CM)]] ''out'':''' 
Condensor X = -3500 
Condensor Y = -6000 
Condensor Z = 

'''[[Imaging optics module (IOM)|Imaging optics module (IOM)]] ''out'':''' 
Objective X = 
Objective Y = -2500 
Objective Z = 

[[Category:XMG]][[Category:Fluorescence]][[Category:Diffraction]][[Category:Tomography]][[Category:Controls]]

Focusing optics module (FOM)

2010-02-02T20:04:26Z

Vrose:

Back to [[X-Ray Microscopy]]
[[Image:FOM positions.jpg|thumb|Zone plate holder; upstream view]]
[[Image:FOM ZP holder.jpg|thumb|Zone plate holder; side view]]

==10 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||1830 ||-17.76||-1548.8||-1409 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - ||3814 ||-1614 || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||1845 ||62.36 ||2510.6 ||-1409 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||1845 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

==11.2 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||-1295 ||-17.76||-1548.8||500 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - || - || - || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||-1280 ||52.4 ||2505 ||500 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||-1280 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

[[Image:OSA positions.jpg|thumb|OSA]]
----
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''OSA description '''
| align="center" style="background:#f0f0f0;"|'''Date installed'''
|-
|-
| 4|| none || -
|-
| [[media:OSA-3.tif|3]]|| none || 02/02/10
|-
| [[media:OSA-2.tif|2]]|| 100 um || 02/02/10 lead on back
|-
| [[media:OSA-1.tif|1]]|| 30 um inside cone || 02/02/10
|-
|}
----
Focus of the ZP24/133sngl zone plate: 
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Energy (keV) at DCM'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 10.0 ||1150 ||Mar/5/09 Cr wire/Staff ||
|-
| 11.2 ||-2030 ||Mar/19/09 Ni pad/Moutanabbir ||
|}
----
'''[[Condenser module (CM)|Condenser module (CM)]] ''out'':''' 
Condensor X = -3500 
Condensor Y = -6000 
Condensor Z = 

'''[[Imaging optics module (IOM)|Imaging optics module (IOM)]] ''out'':''' 
Objective X = 
Objective Y = -2500 
Objective Z = 

[[Category:XMG]][[Category:Fluorescence]][[Category:Diffraction]][[Category:Tomography]][[Category:Controls]]

Fluorescence

2009-11-08T22:56:26Z

Vrose: /* Coordinate Systems */

Back to [[X-Ray Microscopy]]
===Nanoprobe Instrument===
*[[Focusing optics module (FOM)]]
*[[Condenser module (CM)]]
*[[Imaging optics module (IOM)]]
*[[Sample module (SM)]]
*[[NPI Manuals]]
*[[media:nanoPi_usersmanual_2007_07_20.pdf|Manual for Nanoprobe Instrument]]

===Detectors===
*[[Vortex ME4 (SII 4-element silicon drift diode)]]
*[[Vortex (SII 1-element silicon drift diode)]]
*[[Ge detector (Canberra single element LEGe)]]
*[[Region of Interest (ROI)]]

===Optics===
*[[Focusing zone plates]]
===Standards===
*[[Fluorescence Standard Reference Material]]
===Analysis===
Instruction to [[media:Import_Fluo_scans_into_Origin-1.pdf|import 2D fluorescence images into Origin]].
===Coordinate Systems===
The relation between the coordinate system of the [[Coolsnap]] camera and the y-x-scans in scanView is shown in this [[media:Fluorescence vs transmission orientation.jpg|picture]]. 

Take Coolsnap transmission image and rotate it by 270 degree. Now flip horizontal. This gives you the orientation of HPiezoY-X scans.

===Links===
[http://xdb.lbl.gov X-ray Data Booklet]
[[image:DataBook_Image_Small.jpg]] 
[http://henke.lbl.gov/optical_constants/ X-ray interactions with matter] 
[[Category:XMG]][[Category:Fluorescence]][[Category:Controls]]

Fluorescence

2009-11-08T22:54:39Z

Vrose: /* Coordinate Systems */

Back to [[X-Ray Microscopy]]
===Nanoprobe Instrument===
*[[Focusing optics module (FOM)]]
*[[Condenser module (CM)]]
*[[Imaging optics module (IOM)]]
*[[Sample module (SM)]]
*[[NPI Manuals]]
*[[media:nanoPi_usersmanual_2007_07_20.pdf|Manual for Nanoprobe Instrument]]

===Detectors===
*[[Vortex ME4 (SII 4-element silicon drift diode)]]
*[[Vortex (SII 1-element silicon drift diode)]]
*[[Ge detector (Canberra single element LEGe)]]
*[[Region of Interest (ROI)]]

===Optics===
*[[Focusing zone plates]]
===Standards===
*[[Fluorescence Standard Reference Material]]
===Analysis===
Instruction to [[media:Import_Fluo_scans_into_Origin-1.pdf|import 2D fluorescence images into Origin]].
===Coordinate Systems===
The relation between the coordinate system of the [[Coolsnap]] camera and the y-x-scans in scanView is shown in this [[media:Fluorescence vs transmission orientation.jpg|picture]]. 

Take Coolsnap transmission image and rotate it by 270 degree. Now flip horizontally. This gives you the orientation of HPiezoY-X scans.

===Links===
[http://xdb.lbl.gov X-ray Data Booklet]
[[image:DataBook_Image_Small.jpg]] 
[http://henke.lbl.gov/optical_constants/ X-ray interactions with matter] 
[[Category:XMG]][[Category:Fluorescence]][[Category:Controls]]

Fluorescence

2009-11-08T22:52:39Z

Vrose: /* Coordinate Systems */

Back to [[X-Ray Microscopy]]
===Nanoprobe Instrument===
*[[Focusing optics module (FOM)]]
*[[Condenser module (CM)]]
*[[Imaging optics module (IOM)]]
*[[Sample module (SM)]]
*[[NPI Manuals]]
*[[media:nanoPi_usersmanual_2007_07_20.pdf|Manual for Nanoprobe Instrument]]

===Detectors===
*[[Vortex ME4 (SII 4-element silicon drift diode)]]
*[[Vortex (SII 1-element silicon drift diode)]]
*[[Ge detector (Canberra single element LEGe)]]
*[[Region of Interest (ROI)]]

===Optics===
*[[Focusing zone plates]]
===Standards===
*[[Fluorescence Standard Reference Material]]
===Analysis===
Instruction to [[media:Import_Fluo_scans_into_Origin-1.pdf|import 2D fluorescence images into Origin]].
===Coordinate Systems===
The relation between the coordinate system of the [[Coolsnap]] camera and the y-x-scans in scanView is shown in this [[media:Fluorescence vs transmission orientation.jpg|picture]]. 

Take Coolsnap transmission image and rotate by 270 degree. Now flip horizontally. This gives you the orientation of HPiezoY-X scans.

===Links===
[http://xdb.lbl.gov X-ray Data Booklet]
[[image:DataBook_Image_Small.jpg]] 
[http://henke.lbl.gov/optical_constants/ X-ray interactions with matter] 
[[Category:XMG]][[Category:Fluorescence]][[Category:Controls]]

Attocubes

2009-08-21T17:22:44Z

Vrose:

Back to [[X-Ray Microscopy]] 

===Center-of-rotation alignment===
[[media:Robert's Tomo Alignment.pdf|Robert's Notes]] 
[[media:Nanoprobe_tomography_alignment_for_dummies.pdf‎‎| John Provis' down under view of tomography]]

===Attocube login===

ssh -Y epicsioc@ioc26idbpol

password epicsioc

cd epics
cd attocube

start_epics_atto

start_epics_ioc

[[Category:XMG]][[Category:Tomography]][[Category:Controls]]

File:Nanoprobe tomography alignment for dummies.pdf

2009-08-21T17:21:31Z

Vrose:

Attocubes

2009-08-19T19:56:15Z

Vrose: /* Center-of-rotation alignment */

Back to [[X-Ray Microscopy]] 

===Center-of-rotation alignment===
[[media:Robert's Tomo Alignment.pdf|Robert's Notes]] 
[[media:John's_Tomo.pdf‎| John Provis' down under view of tomography]]

===Attocube login===

ssh -Y epicsioc@ioc26idbpol

password epicsioc

cd epics
cd attocube

start_epics_atto

start_epics_ioc

[[Category:XMG]][[Category:Tomography]][[Category:Controls]]

Attocubes

2009-08-19T19:56:02Z

Vrose: /* Center-of-rotation alignment */

Back to [[X-Ray Microscopy]] 

===Center-of-rotation alignment===
[[media:Robert's Tomo Alignment.pdf|Robert's Notes]]
[[media:John's_Tomo.pdf‎| John Provis' down under view of tomography]]

===Attocube login===

ssh -Y epicsioc@ioc26idbpol

password epicsioc

cd epics
cd attocube

start_epics_atto

start_epics_ioc

[[Category:XMG]][[Category:Tomography]][[Category:Controls]]

File:John's Tomo.pdf

2009-08-19T19:54:30Z

Vrose: John Provis view of tomography alignment

John Provis view of tomography alignment

Imaging zone plates

2009-08-12T23:28:55Z

Vrose:

Back to [[X-Ray Microscopy]] 

[[ZP 24-80-6|ZP24-80-6]]

Purpose: High-resolution imaging
Energy range: 8 - 12 keV
Outermost zone width: drN = 24 nm
Diameter: D = 80 um (
Material: Gold
Thickness: 2x 300 nm stack

Spec sheet:

Parameters: [[media:Zp24_80_3_1132_2_5_ANL_19jun2007.doc]]

Efficiency graph:

Tomography

2009-08-12T23:28:01Z

Vrose:

Back to [[X-Ray Microscopy]]
===Nanoprobe Instrument===
*[[Focusing optics module (FOM)]]
*[[Condenser module (CM)]]
*[[Imaging optics module (IOM)]]
*[[Sample module (SM)]]
*[[Attocubes|Attocube System]]
*[[NPI Manuals]]

===Detectors===
*[[PIXIS 1024XF]]
===Optics===
*[[Imaging zone plates]]
===Links===
[http://xdb.lbl.gov X-ray Data Booklet]
[[image:DataBook_Image_Small.jpg]] 
[http://henke.lbl.gov/optical_constants/ X-ray interactions with matter]
[[Category:XMG]][[Category:Tomography]][[Category:Controls]]

File:Robert's Tomo Alignment.pdf

2009-08-12T23:24:07Z

Vrose: uploaded a new version of "Image:Robert's Tomo Alignment.pdf": Robert's handwritten notes from August 10,2009

Robert's handwritten notes from August 10, 2009

File:Robert's Tomo Alignment.pdf

2009-08-12T23:20:11Z

Vrose: Robert's handwritten notes from August 10, 2009

Robert's handwritten notes from August 10, 2009

Attocubes

2009-08-12T23:19:22Z

Vrose:

Back to [[X-Ray Microscopy]] 

===Center-of-rotation alignment===
[[media:Robert's Tomo Alignment.pdf|Robert's Notes]]

===Attocube login===

ssh -Y epicsioc@ioc26idbpol

password epicsioc

cd epics
cd attocube

start_epics_atto

start_epics_ioc

[[Category:XMG]][[Category:Tomography]][[Category:Controls]]

Attocubes

2009-08-12T23:19:12Z

Vrose:

Back to [[X-Ray Microscopy]] 

===Center-of-rotation alignment===
[[[media:Robert's Tomo Alignment.pdf|Robert's Notes]]

===Attocube login===

ssh -Y epicsioc@ioc26idbpol

password epicsioc

cd epics
cd attocube

start_epics_atto

start_epics_ioc

[[Category:XMG]][[Category:Tomography]][[Category:Controls]]

Focusing optics module (FOM)

2009-08-12T17:30:42Z

Vrose:

Back to [[X-Ray Microscopy]]
[[Image:FOM positions.jpg|thumb|Zone plate holder; upstream view]]
[[Image:FOM ZP holder.jpg|thumb|Zone plate holder; side view]]

==10 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||1830 ||-17.76||-1548.8||-1409 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - ||3814 ||-1614 || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||1845 ||62.36 ||2510.6 ||-1409 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||1845 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

==11.2 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||-1295 ||-17.76||-1548.8||500 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - || - || - || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||-1280 ||52.4 ||2505 ||500 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||-1280 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

[[Image:OSA positions.jpg|thumb|OSA]]
----
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''OSA description '''
| align="center" style="background:#f0f0f0;"|'''Date installed'''
|-
|-
| 4|| unknown || -
|-
| [[media:OSA-3.tif|3]]|| 35 um || used, op. microscope 12 AUG 09 OK
|-
| [[media:OSA-2.tif|2]]|| 50 um Hole, 3.04mmODx0.25, Pt95Ir5, Ted Pella#61050 || 12 Aug 09, MH
|-
| [[media:OSA-1.tif|1]]|| 30 um w/ cone || May 09, MH, op. microscope 12 AUG 09 OK
|-
|}
----
Focus of the ZP24/133sngl zone plate: 
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Energy (keV) at DCM'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 10.0 ||1150 ||Mar/5/09 Cr wire/Staff ||
|-
| 11.2 ||-2030 ||Mar/19/09 Ni pad/Moutanabbir ||
|}
----
'''[[Condenser module (CM)|Condenser module (CM)]] ''out'':''' 
Condensor X = -3500 
Condensor Y = -6000 
Condensor Z = 

'''[[Imaging optics module (IOM)|Imaging optics module (IOM)]] ''out'':''' 
Objective X = 
Objective Y = -2500 
Objective Z = 

[[Category:XMG]][[Category:Fluorescence]][[Category:Diffraction]][[Category:Tomography]][[Category:Controls]]

File:OSA-3.tif

2009-08-12T17:27:50Z

Vrose: OSA 3, 35um, used, 20x 12 AUG 09

OSA 3, 35um, used, 20x 12 AUG 09

File:OSA-1.tif

2009-08-12T17:25:07Z

Vrose: OSA 35um used, 20X, 12 AUG 09

OSA 35um used, 20X, 12 AUG 09

Focusing optics module (FOM)

2009-08-12T17:20:48Z

Vrose:

Back to [[X-Ray Microscopy]]
[[Image:FOM positions.jpg|thumb|Zone plate holder; upstream view]]
[[Image:FOM ZP holder.jpg|thumb|Zone plate holder; side view]]

==10 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||1830 ||-17.76||-1548.8||-1409 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - ||3814 ||-1614 || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||1845 ||62.36 ||2510.6 ||-1409 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||1845 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

==11.2 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||-1295 ||-17.76||-1548.8||500 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - || - || - || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||-1280 ||52.4 ||2505 ||500 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||-1280 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

[[Image:OSA positions.jpg|thumb|OSA]]
----
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''OSA description '''
| align="center" style="background:#f0f0f0;"|'''Date installed'''
|-
|-
| 4|| unknown || -
|-
| 3|| 35 um || used, op. microscope 12 AUG 09 OK
|-
| [[media:OSA-2.tif|2]]|| 50 um Hole, 3.04mmODx0.25, Pt95Ir5, Ted Pella#61050 || 12 Aug 09, MH
|-
| 1|| 30 um w/ cone || May 09, MH, op. microscope 12 AUG 09 OK
|-
|}
----
Focus of the ZP24/133sngl zone plate: 
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Energy (keV) at DCM'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 10.0 ||1150 ||Mar/5/09 Cr wire/Staff ||
|-
| 11.2 ||-2030 ||Mar/19/09 Ni pad/Moutanabbir ||
|}
----
'''[[Condenser module (CM)|Condenser module (CM)]] ''out'':''' 
Condensor X = -3500 
Condensor Y = -6000 
Condensor Z = 

'''[[Imaging optics module (IOM)|Imaging optics module (IOM)]] ''out'':''' 
Objective X = 
Objective Y = -2500 
Objective Z = 

[[Category:XMG]][[Category:Fluorescence]][[Category:Diffraction]][[Category:Tomography]][[Category:Controls]]

File:OSA-2.tif

2009-08-12T17:16:47Z

Vrose: 50 um Hole, 20x, mounted 12 AUG 09

50 um Hole, 20x, mounted 12 AUG 09

PIXIS 1024XF

2009-08-12T17:12:51Z

Vrose:

Back to [[X-Ray Microscopy]]
[[Image:PIXIS_XF.jpg|thumb|PIXIS CCD camera]]
===General Information===
'''PIXIS-XF: 1024:''' 1024 x 1024 pixel CCD for lens-free, indirect imaging of X-rays using phosphor screens. Pixel size 13 x 13 um.
===Tube lens (Tomography)===
Tubelens(2x Objevtive) = -12050 
Tubelens (10x Objective) = ??? 
Tueblens(20x Objective) = ???
===Vendor Information===
[[Image:Princeton_Instruments_PIXIS_XF1024F_Rev_B1A.pdf|Alternate Text]]
[[Category:XMG]][[Category:Diffraction]][[Category:Tomography]]

Focusing optics module (FOM)

2009-08-12T17:04:15Z

Vrose:

Back to [[X-Ray Microscopy]]
[[Image:FOM positions.jpg|thumb|Zone plate holder; upstream view]]
[[Image:FOM ZP holder.jpg|thumb|Zone plate holder; side view]]

==10 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||1830 ||-17.76||-1548.8||-1409 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - ||3814 ||-1614 || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||1845 ||62.36 ||2510.6 ||-1409 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||1845 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

==11.2 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||-1295 ||-17.76||-1548.8||500 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - || - || - || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||-1280 ||52.4 ||2505 ||500 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||-1280 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

[[Image:OSA positions.jpg|thumb|OSA]]
----
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''OSA description '''
| align="center" style="background:#f0f0f0;"|'''Date installed'''
|-
|-
| 4|| unknown || -
|-
| 3|| 35 um || used, op. microscope 12 AUG 09 OK
|-
| 2|| 50 um Hole, 3.04mmODx0.25, Pt95Ir5, Ted Pella#61050 || 12 Aug 09, MH
|-
| 1|| 30 um w/ cone || May 09, MH, op. microscope 12 AUG 09 OK
|-
|}
----
Focus of the ZP24/133sngl zone plate: 
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Energy (keV) at DCM'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 10.0 ||1150 ||Mar/5/09 Cr wire/Staff ||
|-
| 11.2 ||-2030 ||Mar/19/09 Ni pad/Moutanabbir ||
|}
----
'''[[Condenser module (CM)|Condenser module (CM)]] ''out'':''' 
Condensor X = -3500 
Condensor Y = -6000 
Condensor Z = 

'''[[Imaging optics module (IOM)|Imaging optics module (IOM)]] ''out'':''' 
Objective X = 
Objective Y = -2500 
Objective Z = 

[[Category:XMG]][[Category:Fluorescence]][[Category:Diffraction]][[Category:Tomography]][[Category:Controls]]

Focusing optics module (FOM)

2009-08-12T16:20:29Z

Vrose:

Back to [[X-Ray Microscopy]]
[[Image:FOM positions.jpg|thumb|Zone plate holder; upstream view]]
[[Image:FOM ZP holder.jpg|thumb|Zone plate holder; side view]]

==10 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||1830 ||-17.76||-1548.8||-1409 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - ||3814 ||-1614 || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||1845 ||62.36 ||2510.6 ||-1409 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||1845 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

==11.2 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||-1295 ||-17.76||-1548.8||500 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - || - || - || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||-1280 ||52.4 ||2505 ||500 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||-1280 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

[[Image:OSA positions.jpg|thumb|OSA]]
----
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''OSA description '''
| align="center" style="background:#f0f0f0;"|'''Date installed'''
|-
|-
| 4|| unknown || -
|-
| 3|| unknown || -
|-
| 2|| 50 um Hole, 3.04mmODx0.25, Pt95Ir5, Ted Pella#61050 || 12 Aug 09, MH
|-
| 1|| 30 um w/ cone || May 09, MH
|-
|}
----
Focus of the ZP24/133sngl zone plate: 
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Energy (keV) at DCM'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 10.0 ||1150 ||Mar/5/09 Cr wire/Staff ||
|-
| 11.2 ||-2030 ||Mar/19/09 Ni pad/Moutanabbir ||
|}
----
'''[[Condenser module (CM)|Condenser module (CM)]] ''out'':''' 
Condensor X = -3500 
Condensor Y = -6000 
Condensor Z = 

'''[[Imaging optics module (IOM)|Imaging optics module (IOM)]] ''out'':''' 
Objective X = 
Objective Y = -2500 
Objective Z = 

[[Category:XMG]][[Category:Fluorescence]][[Category:Diffraction]][[Category:Tomography]][[Category:Controls]]

Attocubes

2009-08-08T19:37:09Z

Vrose:

Back to [[X-Ray Microscopy]] 

===Attocube login===

ssh -Y epicsioc@ioc26idbpol

password epicsioc

cd epics
cd attocube

start_epics_atto

start_epics_ioc

[[Category:XMG]][[Category:Tomography]][[Category:Controls]]

Attocubes

2009-08-08T19:29:56Z

Vrose:

Back to [[X-Ray Microscopy]] 

Attocube login

ssh -Y epicsioc@ioc26idbpol

password epicsioc

cd epics
cd attocube

start_epics_atto

start_epics_ioc

[[Category:XMG]][[Category:Tomography]][[Category:Controls]]

Tomography

2009-08-08T19:29:37Z

Vrose: /* Links */

Back to [[X-Ray Microscopy]]
===Nanoprobe Instrument===
*[[Focusing optics module (FOM)]]
*[[Condenser module (CM)]]
*[[Imaging optics module (IOM)]]
*[[Sample module (SM)]]
*[[Attocubes]]
*[[NPI Manuals]]

===Detectors===
*[[PIXIS 1024XF]]
===Optics===
*[[Imaging zone plates]]
===Links===
[http://xdb.lbl.gov X-ray Data Booklet]
[[image:DataBook_Image_Small.jpg]] 
[http://henke.lbl.gov/optical_constants/ X-ray interactions with matter]
[[Category:XMG]][[Category:Tomography]][[Category:Controls]]

Attocubes

2009-08-08T19:29:11Z

Vrose: New page: Back to X-Ray Microscopy Category:XMGCategory:TomographyCategory:Controls

Back to [[X-Ray Microscopy]] 

[[Category:XMG]][[Category:Tomography]][[Category:Controls]]

Tomography

2009-08-08T19:27:53Z

Vrose: /* Nanoprobe Instrument */

Back to [[X-Ray Microscopy]]
===Nanoprobe Instrument===
*[[Focusing optics module (FOM)]]
*[[Condenser module (CM)]]
*[[Imaging optics module (IOM)]]
*[[Sample module (SM)]]
*[[Attocubes]]
*[[NPI Manuals]]

===Detectors===
*[[PIXIS 1024XF]]
===Optics===
*[[Imaging zone plates]]
===Links===
[http://xdb.lbl.gov X-ray Data Booklet]
[[image:DataBook_Image_Small.jpg]] 
[http://henke.lbl.gov/optical_constants/ X-ray interactions with matter]
[[Category:XMG]][[Category:Tomography]][[Category:Controls]]

Attocube login

ssh -Y epicsioc@ioc26idbpol

password epicsioc

cd epics
cd attocube

start_epics_atto

start_epics_ioc

Region of Interest (ROI)

2009-06-15T16:11:50Z

Vrose: New page: ROIs are set by the ''MCA Display'' software. A local version can be found on Gluck.

ROIs are set by the ''MCA Display'' software. A local version can be found on [[Gluck]].

Fluorescence

2009-06-15T16:08:18Z

Vrose: /* Detectors */

Back to [[X-Ray Microscopy]]
===Nanoprobe Instrument===
*[[Focusing optics module (FOM)]]
*[[Condenser module (CM)]]
*[[Imaging optics module (IOM)]]
*[[Sample module (SM)]]
*[[NPI Manuals]]
*[[media:nanoPi_usersmanual_2007_07_20.pdf|Manual for Nanoprobe Instrument]]

===Detectors===
*[[Vortex ME4 (SII 4-element silicon drift diode)]]
*[[Vortex (SII 1-element silicon drift diode)]]
*[[Ge detector (Canberra single element LEGe)]]
*[[Region of Interest (ROI)]]

===Optics===
*[[Focusing zone plates]]
===Standards===
*[[Fluorescence Standard Reference Material]]
===Analysis===
Instruction to [[media:Import_Fluo_scans_into_Origin-1.pdf|import 2D fluorescence images into Origin]].
===Coordinate Systems===
The relation between the coordinate system of the [[Coolsnap]] camera and the y-x-scans in scanView is shown in this [[media:Fluorescence vs transmission orientation.jpg|picture]].
===Links===
[http://xdb.lbl.gov X-ray Data Booklet]
[[image:DataBook_Image_Small.jpg]] 
[http://henke.lbl.gov/optical_constants/ X-ray interactions with matter] 
[[Category:XMG]][[Category:Fluorescence]][[Category:Controls]]

Focusing optics module (FOM)

2009-06-14T03:06:17Z

Vrose:

Back to [[X-Ray Microscopy]]
[[Image:FOM positions.jpg|thumb|Zone plate holder; upstream view]]
[[Image:FOM ZP holder.jpg|thumb|Zone plate holder; side view]]

==10 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||1830 ||-17.76||-1548.8||-1409 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - ||3814 ||-1614 || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||1845 ||62.36 ||2510.6 ||-1409 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||1845 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

==11.2 keV==
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Position'''
| align="center" style="background:#f0f0f0;"|'''ZP name'''
| align="center" style="background:#f0f0f0;"|'''Focus X'''
| align="center" style="background:#f0f0f0;"|'''Focus Y'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''OSA X'''
| align="center" style="background:#f0f0f0;"|'''OSA Y'''
| align="center" style="background:#f0f0f0;"|'''OSA Z'''
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 1|| - || || || - || - || - || - || -|| ||
|-
| 2||ZP24-133-6 ||110 ||2787 ||-1295 ||-17.76||-1548.8||500 ||#1 ||June 12, MH ||
|-
| 3||ZP50-240-9 ||-3687 ||2851 || - || - || - || - ||#1 ||June 12, MH ||
|-
| 4|| - ||3714 ||-1193 || - || - || - || - || -|| ||
|-
| 5||ZP24-133-3 ||45 ||-1268 ||-1280 ||52.4 ||2505 ||500 ||#1 ||June 12, MH ||
|-
| 6|| ||-4000 ||-1554 ||-1280 || - || - || - || -|| ||
|-
| 7|| || - || - || - || - || - || - || -|| ||
|}

[[Image:OSA positions.jpg|thumb|OSA]]
----
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''OSA #'''
| align="center" style="background:#f0f0f0;"|'''OSA description '''
| align="center" style="background:#f0f0f0;"|'''Date installed'''
|-
|-
| 4|| unknown || -
|-
| 3|| unknown || -
|-
| 2|| 35 um w/ cone || May 09, MH
|-
| 1|| 30 um w/ cone || May 09, MH
|-
|}
----
Focus of the ZP24/133sngl zone plate: 
{| {{table}} style="text-align:center"
| align="center" style="background:#f0f0f0;"|'''Energy (keV) at DCM'''
| align="center" style="background:#f0f0f0;"|'''Focus Z'''
| align="center" style="background:#f0f0f0;"|'''Remarks'''
|-
|-
| 10.0 ||1150 ||Mar/5/09 Cr wire/Staff ||
|-
| 11.2 ||-2030 ||Mar/19/09 Ni pad/Moutanabbir ||
|}
----
'''[[Condenser module (CM)|Condenser module (CM)]] ''out'':''' 
Condensor X = -3500 
Condensor Y = -6000 
Condensor Z = 

'''[[Imaging optics module (IOM)|Imaging optics module (IOM)]] ''out'':''' 
Objective X = 
Objective Y = -2500 
Objective Z = 

[[Category:XMG]][[Category:Fluorescence]][[Category:Diffraction]][[Category:Tomography]][[Category:Controls]]

Homing procedure for vertical focusing motors

2009-06-10T18:57:18Z

Vrose:

Back to [[X-Ray Microscopy]]

This procedure describes the homing of the motors vzm, vyu, and vyd. 
At the beginning make sure that not 2 MLLs are mounted in order to avoid collisions during the homing procedure. 

1) Switch the controller PI C-848 off. 
2) Move vuy and vud by hand to the upper hard limit. 
3) Switch the controller PI C-848 on. 
4) Execute ''initPIC848'' in a terminal. This initializes the motors. 
5) Press ''HomR'' in the MEDM screen of vyu. This will home the motor. During homing the MEDM screen shows the message ''Comm. Failur''. This can be cleared by pressing ''STATUS''. After finding the home position of vyu the User/Dial Readback values are -20,700.0138 and Raw 3000002. 
6) Move vyu down to User/Dial=-10,000. This is important to avoid the flexural pivot's elastic limit from getting exceeded during homing of the vyd motor. 
7) Press ''HomR'' in the MEDM screen of vyd. The motor will be homed with the final position User/Dial=-20,700.0138 and Raw=3000002. 
8) Finally, home vzm by pressing ''HomR'' in the MEDM screen. The home position of vzm is User/Dial=-81,600.0085 and Raw=9600001.

[[Category:MLL]]

Homing procedure for vertical focusing motors

2009-06-10T18:53:49Z

Vrose:

Back to [[X-Ray Microscopy]]

This procedure describes the homing of the motors vzm, vyu, vyd. 
At the beginning make sure that not 2 MLLs are mounted in order to avoid collisions during the homing procedure. 

1) Switch the controller PI C-848 off. 
2) Move vuy and vud by hand to the upper hard limit. 
3) Switch the controller PI C-848 on. 
4) Execute ''initPIC848'' in a terminal. This initializes the motors. 
5) Press ''HomR'' in the MEDM screen of vyu. This will home the motor. During homing the MEDM screen shows the message ''Comm. Failur''. This can be cleared by pressing ''STATUS''. After finding the home position of vyu the User/Dial Readback values are -20,700.0138 and Raw 3000002. 
6) Move vyu down to User/Dial=-10,000. This is important to avoid the flexural pivot's elastic limit from getting exceeded during homing of the vyd motor. 
7) Press ''HomR'' in the MEDM screen of vyd. The motor will be homed with the final position User/Dial=-20,700.0138 and Raw=3000002. 
8) Finally, home vzm by pressing ''HomR'' in the MEDM screen. The home position of vzm is User/Dial=-81,600.0085 and Raw=9600001.

[[Category:MLL]]

Homing procedure for vertical focusing motors

2009-06-10T18:53:11Z

Vrose:

Back to [[X-Ray Microscopy]]

This procedure describes the homing of the motors vzm, vyu, vyd. 
At the beginning make sure that not 2 MLLs are mounted in order to avoid collisions during the homing procedure. 

1) Switch the controller PI C-848 off. 
2) Move vuy and vud by hand to the upper hard limit. 
3) Switch the controller PI C-848 on. 
4) Execute ''initPIC848'' in a terminal. This initializes the motors. 
5) Press ''HomR'' in the MEDM screen of vyu. This will home the motor. During homing the MEDM screen shows the message ''Comm. Failure". This can be cleared by pressing ''STATUS''. After finding the home position of vyu the User/Dial Readback values are -20,700.0138 and Raw 3000002. 
6) Move vyu down to User/Dial=-10,000. This is important to avoid the flexural pivot's elastic limit from getting exceeded during homing of the vyd motor. 
7) Press ''HomR'' in the MEDM screen of vyd. The motor will be homed with the final position User/Dial=-20,700.0138 and Raw=3000002. 
8) Finally, home vzm by pressing ''HomR'' in the MEDM screen. The home position of vzm is User/Dial=-81,600.0085 and Raw=9600001.

[[Category:MLL]]

Homing procedure for vertical focusing motors

2009-06-10T18:52:41Z

Vrose: New page: Back to X-Ray Microscopy This procedure describes the homing of the motors vzm, vyu, vyd. At the beginning make sure that not 2 MLLs are mounted in order to avoid collisions dur...

Back to [[X-Ray Microscopy]]

This procedure describes the homing of the motors vzm, vyu, vyd. 
At the beginning make sure that not 2 MLLs are mounted in order to avoid collisions during the homing procedure. 

1) Switch the controller PI C-848 off. 
2) Move vuy and vud by hand to upper hard limit. 
3) Switch the controller PI C-848 on. 
4) Execute ''initPIC848'' in a terminal. This initializes the motors. 
5) Press ''HomR'' in the MEDM screen of vyu. This will home the motor. During homing the MEDM screen shows the message ''Comm. Failure". This can be cleared by pressing ''STATUS''. After finding the home position of vyu the User/Dial Readback values are -20,700.0138 and Raw 3000002. 
6) Move vyu down to User/Dial=-10,000. This is important to avoid the flexural pivot's elastic limit from getting exceeded during homing of the vyd motor. 
7) Press ''HomR'' in the MEDM screen of vyd. The motor will be homed with the final position User/Dial=-20,700.0138 and Raw=3000002. 
8) Finally, home vzm by pressing ''HomR'' in the MEDM screen. The home position of vzm is User/Dial=-81,600.0085 and Raw=9600001.

[[Category:MLL]]

The MLL Project

2009-06-10T18:31:12Z

Vrose: /* How to... */

Back to [[X-Ray Microscopy]]

[[Image:IMG_4458.JPG|thumb|MLL positioning device]]

===Trouble Shooting===
*[[PI-M663 motors referencing timeout]]
*[[Blank EPICS windows]]
*[[Motors vyu and vyd are pinned]]
*[[Ion chamber reading is not correct]]
*[[Linux machine does not print]]
*[[Amptek fluorescence detector is not found by the control software]]
*[[Amtek fluorescence detector found but no counts in the control software]]
*[[New Huber slits are not working]]
===How to...===
*[[Start the MLL controlls]]
*[[Initialize the PI C-848 controller]]
*[[Homing procedure for vertical focusing motors]]
*[[Connect the filter box]]
*[[Connect the Bicron detector]]

===Motor Definitions===
*[[MLL motors]]
*[[Sample stage]]
*[[Macro for horizontal focusing motor corrections]]
*[[Macro for vertical focusing motor corrections]]
*[[Macro for sample motor corrections]]

===Detectors===
*[[Amtek fluorescence detector]]
*[[PIXIS CCD camera]]

===Vibration Isolation System===
*[[TMC Micro-g optical table]]

===EPICS Input Output Controllers===
*[[Soft IOC Rachmaninoff]]

===Spec===
*[[Motor macros]]
*[[Motor scans]]
*[[Counting macros]]
*[[Plotting macros]]
*[http://www.certif.com/spec_manual/idx.html Manual and tutorials]

===Publications===
'''2008'''
*[http://link.aip.org/link/?APPLAB/92/221114/1 Focusing of hard x-rays to 16 nanometers with a multilayer Laue lens]
'''2007'''
*[http://link.aip.org/link/?RSINAK/78/046103/1 Sectioning of multilayers to make a multilayer Laue lens]
*[http://link.aps.org/doi/10.1103/PhysRevB.76.115438 Takagi-Taupin description of x-ray dynamical diffraction from diffractive optics with large numerical aperture]
'''2006'''
*[http://link.aps.org/doi/10.1103/PhysRevLett.96.127401 Nanometer Linear Focusing of Hard X Rays by a Multilayer Laue Lens]
'''2005'''
*[http://link.aip.org/link/?JAPIAU/98/113519/1 Depth-graded multilayers for application in transmission geometry as linear zone plates]
[[Category:MLL]]

Initialize the PI C-848 controller

2009-06-08T22:33:39Z

Vrose:

Back to [[X-Ray Microscopy]]

In order to initialize the PI C-848 controller type ''initPIC848'' into a terminal and press ''enter''.

The ''initPIC848'' command resides in the home/user26id/bin directory of all Linux machines. The command is linked to ''initPIC848'' in the directory user26id@desprez/CNMshare/s26id-raid/ioc26idcMLL/bin.

Allocation of motors:

{| {{table}}
| align="center" style="background:#f0f0f0;"|'''controller'''
| align="center" style="background:#f0f0f0;"|'''motor'''
| align="center" style="background:#f0f0f0;"|'''description'''
|-
| A||vz||vertical focusing linear z
|-
| B||vyd||vertical focusing linear y downstream
|-
| C||vyu||vertical focusing linear y upstream
|-
|}

Manual: [[media:C848_User_MS100E110.pdf]]

[[Category:MLL]]

Initialize the PI C-848 controller

2009-06-08T22:32:14Z

Vrose:

File:C848 User MS100E110.pdf

2009-06-08T22:31:14Z

Vrose:

Blank EPICS windows

2009-06-05T15:37:05Z

Vrose:

Back to [[X-Ray Microscopy]]

If the motor windows go blank the EPICS network connection is lost. The soft-IOC and EPICS must be restarted.

'''Solution''': 1. Go to the directory home/user26id/mll/iocBoot/ioc26idcMLL on ''Rachmaninoff''. (Shows up as ioc26idcMLL on KVM) 
2. Type ''run'' and press ''enter'' 
If the blank MEDM window on Desprez were already open, MEDM windows will update automatically. 
Otherwise continue with the following steps in order to [[Start the MLL controlls|start the MLL controlls]]. 
[[Category:MLL]]